Exploratory Data Analysis and Essential Statistics using R
Location: Ottawa ON
Date: January 24-25, 2011
Module 1: Introduction to R (Faculty: Daniele Merico)
PDF | | Module 2: Exploratory data analysis and common statistical assumptions in biology (Faculty: Daniele Merico)
PDF | PPT | Module 3: Hypothesis testing (Faculty: Daniele Merico)
PDF | PPT | Module 4: Regression (Faculty: Aline Tabet)
PDF | PPT | MP4 (VIDEO) | M4V (IPOD)Module 5: Classification (Faculty: Aline Tabet)
PDF | PPT | Module 6: Data reduction (Faculty: Gerald Quon)
PDF | | Module 7: Clustering (Faculty: Gerald Quon)
PDF | | MP4 (VIDEO) | M4V (IPOD)
Pathway and Network Analysis on – omics Data
Location: Vancouver BC
Date: May 2-3, 2011
Module 1: Brief introduction to gene lists (Faculty: Gary Bader)
PDF | | Module 2: Finding over-represented pathways in gene lists (Faculty: Quaid Morris)
PDF | PPT | MP4 (VIDEO)Module 3: Regulatory Network Analysis (Faculty: Wyeth Wasserman)
PDF | PPT | MP4 (VIDEO)Module 4: Pathway and network analysis of gene lists (Faculty: Gary Bader)
PDF | PPT | MP4 (VIDEO)Module 5: Gene Function Prediction (Faculty: Quaid Morris)
PDF | PPT | MP4 (VIDEO)
Exploratory Data Analysis and Essential Statistics using R
Location: Vancouver BC
Date: May 30-31, 2011
Module 1: Introduction to R (Faculty: Raphael Gottardo)
PDF | | PART 1 MP4 (VIDEO) PART 2 MP4 (VIDEO)Module 2: Exploratory data analysis and common statistical assumptions in biology (Faculty: Raphael Gottardo)
PDF | | MP4 (VIDEO)Module 3: Hypothesis testing (Faculty: Raphael Gottardo)
PDF | | MP4 (VIDEO)Module 4: Data reduction (Faculty: Raphael Gottardo)
PDF | | MP4 (VIDEO)Module 5: Clustering (Faculty: Sohrab Shah)
PDF | PPT | MP4 (VIDEO)Module 6: Classification (Faculty: Sohrab Shah)
PDF | PPT | Module 7: Regression (Faculty: Sohrab Shah)
PDF | PPT |
Informatics on High Throughput Sequencing Data
Location: Toronto ON
Date: June 13-14, 2011
Module 1: Genome Alignment (Faculty: Michael Stromberg)
PDF | PPT | Module 2: Genome Variation (Faculty: Michael Stromberg)
PDF | PPT | Module 3: Genome Variation (Faculty: Michael Brudno)
PDF | PPT | MP4 (VIDEO)Module 4: Genome visualization (Faculty: Marc Fiume)
PDF | PPT | Module 5: RNA Sequence Analysis (Faculty: Malachi Griffith)
PDF | PPT | MP4 (VIDEO)Module 6: Galaxy (Faculty: Francis Ouellette)
PDF | PPT | MP4 (VIDEO)
Informatics and Statistics for Metabolomics
Location: Edmonton AB
Date: June 16-17, 2011
Module 1: Introduction to metabolomics (Faculty: David Wishart)
PDF | PPT | MP4 (VIDEO)Module 2: Software for Metabolite ID & Quantification (Faculty: David Wishart)
PDF | PPT | Module 3: Metabolite Identification & Annotation (Faculty: David Wishart)
PDF | PPT | PART 2 MP4 (VIDEO)Module 4: Databases for Chemical, Spectral & Biological Data (Faculty: David Wishart)
PDF | | MP4 (VIDEO)Module 5: Backgrounder in Statistical Methods (Faculty: David Wishart)
PDF | PPT | MP4 (VIDEO)Module 6: Metabolomic Data Analysis using MetaboAnalyst (Faculty: David Wishart)
PDF | PPT | MP4 (VIDEO)Module 7: Data Integration, Applications and the Future of Metabolomics (Faculty: David Wishart)
PDF | PPT | MP4 (VIDEO)
Microarray Data Analysis
Location: Toronto ON
Date: July 4-5, 2011
Module 1: Introduction to microarrays and R (Faculty: Paul Boutros)
PDF | PPT | MP4 (VIDEO)Module 2: Quality Control of Microarrays (Faculty: Paul Boutros)
PDF | PPT | MP4 (VIDEO)Module 3: Statistical Analysis (Faculty: Paul Boutros)
PDF | PPT | MP4 (VIDEO)Module 4: Beyond the Microarray Experiment (Faculty: Paul Boutros)
PDF | PPT | MP4 (VIDEO)
Pathway and Network Analysis on – omics Data
Location: Toronto ON
Date: July 7-8, 2011
Module 1: Brief introduction to gene lists (Faculty: Gary Bader)
PDF | PPT | MP4 (VIDEO)Module 2: Finding over-represented pathways in gene lists (Faculty: Quaid Morris)
PDF | PPT | MP4 (VIDEO)Module 3: Pathway & Network Analysis (Faculty: Lincoln Stein)
PDF | PPT | MP4 (VIDEO)Module 4: Network Visualization (Faculty: Gary Bader)
PART 1 PDF | PART 2 PDF | PART 1 PPT | PART 2 PPT | MP4 (VIDEO)Module 5: Gene Function Prediction (Faculty: Quaid Morris)
PDF | PPT | MP4 (VIDEO)
Bioinformatics for Cancer Genomics
Location: Toronto ON
Date: August 28-September 2, 2011
Module 1: Introduction to cancer genomics (Faculty: John McPherson)
PDF | | MP4 (VIDEO)Module 2: Visualizing Cancer Genomic Data (Faculty: Francis Ouellette)
PDF | PPT | MP4 (VIDEO)Module 3: Gene Expression Profiling (Faculty: Paul Boutros)
PDF | PPT | MP4 (VIDEO)Module 4: Genome rearrangements (Faculty: Paul Medvedev)
PDF | PPT | Module 5: Copy Number Alterations (Faculty: Sohrab Shah)
PDF | PPT | MP4 (VIDEO)Module 6: Somatic Mutations (Faculty: Sohrab Shah)
PDF | PPT | MP4 (VIDEO)Module 7: Pathway Analysis & Biological Interpretation (Faculty: Gary Bader)
PDF | PPT | PART 2 MP4 (VIDEO) PART 3 MP4 (VIDEO)Module 8: Integration of Clinical Data (Faculty: Anna Lapuk)
PART 1 PDF | PART 2 PDF | PART 1 PPT | PART 2 PPT | PART 1 MP4 (VIDEO) PART 2 MP4 (VIDEO)
Exploratory Data Analysis and Essential Statistics using R
Location: Toronto ON
Date: September 8-9, 2011
Module 1: Introduction to R (Faculty: Boris Steipe)
PDF | PPT | MP4 (VIDEO)Module 2: Exploratory data analysis and common statistical assumptions in biology (Faculty: Boris Steipe)
PDF | PPT | MP4 (VIDEO)Module 3: Hypothesis testing (Faculty: Boris Steipe)
PDF | PPT | MP4 (VIDEO)Module 4: Data reduction (Faculty: Boris Steipe)
PDF | PPT | PART 1 MP4 (VIDEO)Module 5: Clustering (Faculty: Boris Steipe)
PDF | PPT | Module 6: Classification (Faculty: Boris Steipe)
PDF | PPT | MP4 (VIDEO)Module 7: Regression (Faculty: Boris Steipe)
PDF | PPT | MP4 (VIDEO)
