AsiDesigner

http://sysbio.kribb.re.kr/AsiDesigner/

AsiDesigner is a design software system for siRNA design, that takes into account alternative splicing for mRNA level gene silencing. The software also has the capacity to design siRNAs for silencing of multiple mRNAs simultaneously, to score the performance of designed siRNAs, to search for off-targets with BLAST and FASTA algorithms, and to check for secondary structure energy of siRNAs.

NAR Web Server Issue 2008

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tagsalgorithms alternative splicing messenger rna rna interference rna sequence analysis small interfering rna

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