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Links tagged with 'xenopus laevis'

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SfoldTool Content

http://sfold.wadsworth.org

DNA > Tools For the Bench
Expression > Gene Regulation
RNA > Structure Prediction, Visualization, and Design

Server with three tools for the rational design of small interfering RNAs (Sirna), antisense oligonucleotides (Soligo), and trans-cleaving ribozymes (Sribo). A fourth tool, Srna, returns output including general folding features.

NAR Web Server Issue 2004
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tagsalgorithms animals antisense oligonucleotides antisense rna base sequence bayes theorem binding sites catalytic rna computational biology drug design escherichia coli molecular sequence data nucleic acid conformation phylogeny probability protozoan rna rabbits ribosomal rna rna rna stability small interfering rna spliced leader rna statistical distributions statistical models tetrahymena thermophila thermodynamics transfer rna xenopus laevis

XenBaseDatabase Content

http://www.xenbase.org

Model Organisms > Databases

Xenbase is the model organism database for Xenopus laevis and X. (Silurana) tropicalis. New content has been added including a section on gene expression patterns that incorporates image data from the literature, large scale screens and community submissions. Gene expression data are integrated into the gene catalog via an expression tab and is also searchable by multiple criteria using an expression search interface. Xenbase collaborates with the European Xenopus Research Center (EXRC) to provide a stock center section with data on frog lines supplied by the EXRC. Numerous improvements have also been made to search and navigation. Xenbase is also the source of the Xenopus Anatomical Ontology and for Xenopus gene nomenclature.

NAR Database Issue 2010
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tagsanimals computational biology expressed sequence tags gene expression gene expression profiling genetic databases genetic models nucleic acid databases xenopus xenopus laevis