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Links tagged with 'regression analysis'

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Geno2phenoTool Content

http://www.geno2pheno.org/cgi-bin/geno2pheno.pl

Model Organisms > Other Organisms

Geno2pheno takes as input an HIV-1 pol-gene DNA sequence and estimates phenotypic drug resistance to 17 antiretroviral drugs.

NAR Web Server Issue 2003
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tagsalgorithms anti-hiv agents artificial intelligence automated pattern recognition cluster analysis computational biology computer-assisted drug therapy computing methodologies decision trees disease susceptibility dna sequence analysis drug combinations factual databases gene expression profiling genetic models genetic polymorphism genetic variation genotype hiv hiv infections hiv-1 humans innate immunity molecular sequence data phenotype pol genes regression analysis reproducibility of results sensitivity and specificity statistical models viral dna viral drug resistance viral genome

NeuropredTool Content

http://neuroproteomics.scs.uiuc.edu/neuropred.html

Protein > Proteomics
Protein > Sequence Features

NeuroPred is a tool designed to predict cleavage sites at basic amino acid locations in neuropeptide precursor sequences. Neuropred also computes the mass of the predicted peptides with or without selected post-translational modifications.

NAR Web Server Issue 2006
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tagsamino acid sequence animals aplysia invertebrate hormones logistic models mass spectrometry neuropeptides protein precursors protein sequence analysis regression analysis sensitivity and specificity statistical models

REDUCETool Content

http://bussemaker.bio.columbia.edu/reduce/

DNA > Structure and Sequence Feature Detection
Expression > Gene Regulation
Expression > Transcript Expression Analysis

REDUCE uses a motif-based regression method for the identification of TFBS (transcription factor binding sites) from microarray data in yeast, worm and fly. A free registration is required.

NAR Web Server Issue 2003
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tagsalgorithms animals binding sites database management systems dna sequence analysis drosophila melanogaster gene expression profiling genetic transcription messenger rna nucleic acid regulatory sequences oligonucleotide array sequence analysis regression analysis saccharomyces cerevisiae software design transcription factors