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Links tagged with 'plasmodium falciparum'

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Full-parasitesDatabase Content

http://fullmal.hgc.jp/

DNA > Databases
Model Organisms > Databases
RNA > Databases

Full-Parasites is a transcriptome database of apicomplexa parasites, which include Plasmodium and Toxoplasma species. It contains EST sequences, full length cDNAs, transcription start sites and RNA-seq data sets. Various types of cDNA data resources were interconnected with our original database functionalities. By providing the largest unique full-length cDNA and dynamic transcriptome data, Full-Parasites is useful for understanding host-parasite interactions.

NAR Database Issue 2011
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tagsapicomplexa complementary dna expressed sequence tags gene expression profiling host-parasite interactions humans nucleic acid databases plasmodium falciparum protozoan rna rna sequence analysis toxoplasma transcription initiation site

GeneFizzTool Content

http://pbga.pasteur.fr/GeneFizz/

DNA > Gene Prediction

GeneFizz is a tool for identifying genes using by using the physical characteristics of helix-to-coil transitions in DNA.

NAR Web Server Issue 2003
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tagsalgorithms animals biophysical phenomena biophysics computational biology dna dna sequence analysis drosophila melanogaster genes genetic code genetic models genetic techniques genomics molecular evolution nucleic acid conformation plasmodium falciparum protozoan dna protozoan genes protozoan genome

metaSHARKTool Content

http://bioinformatics.leeds.ac.uk/shark/

Protein > Interactions, Pathways, Enzymes

Metabolic Search And Reconstruction Kit (metaSHARK) provides an interactive visualisation platform for the KEGG metabolic network in the form of the SHARKview applet.

NAR Web Server Issue 2006
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tagsanimals biological models coenzyme a dna sequence analysis eimeria tenella enzymes gene expression profiling genomics metabolism plasmodium falciparum protozoan genome

sgTargetTool Content

http://www.ysbl.york.ac.uk/sgTarget/

Model Organisms > Microbes
Protein > 3-D Structure Prediction
Protein > Proteomics

sgTarget is a structural genomics resource that helps to select and prioritize good targets for structure determination from a list of sequences. Target selection is based on multiple factors including homology searches and a range of physiochemical properties.

NAR Web Server Issue 2006
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tagsanimals genomics plasmodium falciparum protein conformation protein sequence analysis proteins protozoan proteins