>
Tag
> Links tagged with 'molecular cloning'

Links tagged with 'molecular cloning'

RSS FeedCompact ViewList as XMLList as JSON

Found 11 links

Displaying 11 links

ACIDDatabase Content

http://bioinfo.thep.lu.se/acid.html

Expression > Transcript Expression Analysis
Expression > cDNA, EST, SAGE

The Array Clone Information Database (ACID) is a searchable resource for information about human, mouse, and rat cDNA clones. Each clone contains information about the assigned UniGene cluster(s), location in the full-length transcript, assigned gene ontology terms and position in the genome assembly.

downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsanimals chromosome mapping database management systems genetic databases human genome humans mice molecular cloning oligonucleotide array sequence analysis

iCE - internet Contig ExplorerTool Content

http://www.bcgsc.ca/platform/bioinfo/software/ice

DNA > Mapping and Assembly
Model Organisms > General Resources

Viewer for physical map data (for mouse, rat, cow, Cryptococcus); developed at the Genome Sciences Centre, Vancouver.

downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsanimals arabidopsis caenorhabditis caenorhabditis elegans contig mapping dna fingerprinting helminth dna humans mice molecular cloning oryza sativa plant dna rats

PHUSERTool Content

http://www.cbs.dtu.dk/services/phuser/

DNA > Tools For the Bench

Primer Help for Uracil Specific Exision Reagent (PHUSER) is a tool for designing primers specifically for USER fusion and USER cloning applications. Standard primer analyses are also conducted.

NAR Web Server Issue 2011
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsdna dna primers molecular cloning polymerase chain reaction uracil

PosMedTool Content

http://omicspace.riken.jp/PosMed/

Human Genome > Health and Disease
Literature > Text Mining and Semantics
Model Organisms > Mouse and Rat
Model Organisms > Plants

To assist in prioritizing candidate genes discovered in a linkage analysis, Positional Medline (PosMed) executes a full-text search of documents given a query word input and ranks the positional cloning candidate genes based on direct and indirect inference of the hit documents. PosMed currently supports prioritization of positional cloning candidate genes in human, mouse, rat and Arabidopsis thaliana.

NAR Web Server Issue 2009
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsalgorithms animals arabidopsis genes humans medline mice molecular cloning neural networks (computer) rats

Primer3PlusTool Content

http://www.bioinformatics.nl/cgi-bin/primer3plus/primer3plus.cgi

DNA > Tools For the Bench

Primer3Plus is an enhanced web interface to the popular Primer3 PCR primer design program.

NAR Web Server Issue 2007
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsbase sequence computational biology database management systems dna primers genetic techniques molecular cloning molecular sequence data nucleic acid sequence homology polymerase chain reaction

SAGE Home PageTool Content

http://www.sagenet.org/

Expression > cDNA, EST, SAGE

Serial Analysis of Gene Expression; simultaneous expression and map information.

downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsbase sequence complementary dna dna restriction enzymes gene expression gene library genetic techniques humans messenger rna molecular cloning molecular sequence data pancreas polymerase chain reaction

STING MilleniumTool Content

http://luna.bioc.columbia.edu/SMS/STINGm/

Protein > 3-D Structural Features
Protein > 3-D Structure Comparison
Protein > Annotation and Function
Protein > Biochemical Features
Protein > Phylogeny Reconstruction
Protein > Sequence Comparison

STING is a suite of tools for the analysis of protein sequence, structure, stability and function - and the relationships between them.

NAR Web Server Issue 2003NAR Web Server Issue 2005
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsacid anhydride hydrolases algorithms alpha-amylases amino acid sequence amino acid sequence homology amino acids animals beetles binding sites chemical models chymotrypsin color computational biology computer simulation conserved sequence enzyme inhibitors fabaceae hiv integrase hydrogen bonding lectins medicinal plants molecular cloning molecular models molecular sequence data molecular structure online systems ovomucin plant lectins plant proteins proprotein convertases protein binding protein conformation protein databases protein interaction mapping protein sequence analysis protein structural homology proteins quaternary protein structure recombinant proteins sequence alignment structure-activity relationship systems integration x-ray crystallography

TRODTool Content

http://www.cellbio.unige.ch/RNAi.html

DNA > Tools For the Bench
Expression > Gene Regulation
RNA > Structure Prediction, Visualization, and Design

T7 RNAi Oligo Designer (TROD) aids in the design of DNA oligonucleotides for short interfering RNA (siRNA) synthesis with T7 RNA polymerase. It takes an input of a cDNA sequence and outputs a list of DNA oligos for ordering.

NAR Web Server Issue 2004
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagscell line dna-directed rna polymerases double-stranded rna gene silencing green fluorescent proteins hela cells humans luminescent proteins messenger rna molecular cloning molecular sequence data oligodeoxyribonucleotides plasmids recombinant fusion proteins rna interference small interfering rna transfection viral proteins

ViralORFeomeDatabase Content

http://www.viralorfeome.com/

Model Organisms > Databases

ViralORFeome 1.0 is a database and management system that provides an integrated set of bioinformatic tools to clone viral ORFs in the Gateway(R) system. ViralORFeome provides a convenient interface to navigate through virus genome sequences, to design ORF-specific cloning primers, to validate the sequence of generated constructs and to browse established collections of virus ORFs. ViralORFeome has been designed to manage all possible variants or mutants of a given ORF so that the cloning procedure can be applied to any emerging virus strain. A subset of plasmid constructs generated with ViralORFeome platform has been tested with success for heterologous protein expression in different expression systems at proteome scale.

NAR Database Issue 2010
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagscomputational biology genetic databases genetic techniques molecular cloning nucleic acid databases open reading frames protein databases tertiary protein structure viral genes viral genome

WebPrInSeSTool Content

http://webprinses.epfl.ch/

DNA > Mapping and Assembly
DNA > Tools For the Bench

WebPrInSeS is a web server that allows automated full-length clone sequence identification and verification using high-throughput sequencing data from any of the 3 major sequencing platforms.

NAR Web Server Issue 2010
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsanimals complementary dna dna sequence analysis drosophila melanogaster high-throughput screening assays molecular cloning open reading frames

Zinc Finger ToolsTool Content

http://www.scripps.edu/mb/barbas/zfdesign/zfdesignhome.php

DNA > Structure and Sequence Feature Detection
Expression > Gene Regulation

Zinc Finger Tools provides several tools for selecting zinc finger protein target sites and for designing the proteins that will target them.

NAR Web Server Issue 2006
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsamino acid sequence animals base sequence binding sites biomolecular nuclear magnetic resonance cell line combinatorial chemistry techniques computer simulation deoxyribonuclease i deoxyribonucleases dna dna primers dna sequence analysis dna-binding proteins down-regulation drug design enzyme-linked immunosorbent assay epidermal growth factor receptor erbb genes erbb-1 genes erbb-2 genes erbb-2 receptor erbb-3 receptor flow cytometry gene expression profiling gene expression regulation gene library gene targeting genetic promoter regions genetic transcription green fluorescent proteins histidine human genome humans kidney luminescent proteins lysine mice molecular cloning molecular models molecular sequence data mutation nucleic acid conformation oligonucleotides peptide library pliability polymerase chain reaction protein conformation protein engineering proteomics recombinant proteins reporter genes retroviridae secondary protein structure sequence analysis site-directed mutagenesis substrate specificity tertiary protein structure transcription factors transfection up-regulation x-ray crystallography zinc fingers