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Links tagged with 'intergenic dna'

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CRISPRFinderTool Content

http://crispr.u-psud.fr/Server/CRISPRfinder.php

DNA > Structure and Sequence Feature Detection
Model Organisms > Microbes

Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) Finder detects this family of direct repeats found in the DNA of many bacteria and archaea.

NAR Web Server Issue 2007
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tagsalgorithms archaeal genome bacterial genome chromosome mapping computational biology database management systems genetic databases intergenic dna nucleic acid repetitive sequences

CSTminerTool Content

http://www.caspur.it/CSTminer/

DNA > Structure and Sequence Feature Detection
Expression > Gene Regulation
Sequence Comparison > Analysis of Aligned Sequences

CSTminer searches for Conserved Sequence Tags (CST) in pairwise comparisons of genomic sequences. Output is a graphical map showing the location of CSTs overlayed with known Ensembl exons and ESTs. A scoring system reflects coding or non-coding potential of these conserved blocks.

NAR Web Server Issue 2004
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tagsanimals conserved sequence exons genomics humans intergenic dna mice nucleic acid regulatory sequences sequence tagged sites

eShadowTool Content

http://eshadow.dcode.org/

Sequence Comparison > Analysis of Aligned Sequences
Sequence Comparison > Multiple Sequence Alignments

A tool for phylogenetic shadowing of multiple sequences from closely related species. This analyses of multiple sequence alignments can be used to predict putative functional elements.

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tagsanimals computational biology conserved sequence exons genetic databases humans intergenic dna papio peptides proteins software design tertiary protein structure