>
Tag
> Links tagged with 'genome-wide association study'

Links tagged with 'genome-wide association study'

RSS FeedCompact ViewList as XMLList as JSON

Found 8 links

Displaying 8 links

GeSBAPTool Content

http://bioinfo.cipf.es/gesbap/

Expression > Gene Set Analysis
Human Genome > Health and Disease
Human Genome > Sequence Polymorphisms

Gene Set based Analysis of Polymorphisms (GeSBAP) implements the gene set analysis to the evaluation of genome wide association studies. Gene set analysis is based on testing the association of modules of functionally related genes.

NAR Web Server Issue 2009
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsbiological processes breast neoplasms female genes genetic variation genome-wide association study humans single nucleotide polymorphism

GSA-SNPTool Content

http://gsa.muldas.org

Expression > Gene Set Analysis
Human Genome > Genomics

GSA-SNP web server performs gene set analysis (GSA) on genome-wide association data, using 3 different GSA methods.

NAR Web Server Issue 2010
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsadult body height genome-wide association study humans single nucleotide polymorphism

i-GSEA4GWASTool Content

http://gsea4gwas.psych.ac.cn

Human Genome > Genomics
Human Genome > Sequence Polymorphisms

i-GSEA4GWAS is a web server for identification of pathways and gene sets associated with traits. An improved gene set enrichment analysis (i-GSEA) is applied to genome wide association studies (GWAS).

NAR Web Server Issue 2010
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsalgorithms disease genes genome-wide association study humans single nucleotide polymorphism

ICSNPathwayTool Content

http://icsnpathway.psych.ac.cn/

Human Genome > Genomics
Human Genome > Sequence Polymorphisms

ICSNPathway is a web tool for the identification of candidate causal SNPs and their corresponding candidate causal pathways from genome wide association studies. ISCNPathway integrates linkage disequilibrium analysis, functional SNP annotation and pathway based analysis to identify these SNPs and pathways.

NAR Web Server Issue 2011
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsgenome-wide association study humans linkage disequilibrium rheumatoid arthritis single nucleotide polymorphism

SNPinfoTool Content

http://www.niehs.nih.gov/snpinfo

DNA > Sequence Polymorphisms
Expression > Gene Regulation
Expression > Splicing
Protein > 3-D Structure Prediction
RNA > Functional RNAs

A suite of web=based tools for SNP detection. Functional predictions of SNP affect on protein structure, gene regulation, splicing and miRNA binding are incorporated.

NAR Web Server Issue 2009
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsbinding sites genes genetic linkage genetic predisposition to disease genome genome-wide association study humans male micrornas prostatic neoplasms reproducibility of results rna splice sites single nucleotide polymorphism systems integration transcription factors

SNPsynTool Content

http://snpsyn.biolab.si

Expression > Gene Set Analysis
Expression > Networks
Human Genome > Sequence Polymorphisms

SNPsyn is a tool for the discovery of synergistic pairs of SNPs from large genome-wide case-control association studies data on complex diseases. The SNPsyn web server receives GWAS data submissions, invokes the interaction analysis and returns results. The user can explore details on identified SNP-SNP pairs, perform gene set enrichment analysis and interact with the constructed SNP synergy network.

NAR Web Server Issue 2011
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagschromosome mapping genome-wide association study single nucleotide polymorphism

SPOTTool Content

http://spot.cgsmd.isi.edu

Human Genome > Health and Disease
Human Genome > Sequence Polymorphisms

The SNP Prioritization Online Tool (SPOT) is a web server for integrating biological databases into the prioritization of SNPs for further study after a genome wide association study.

NAR Web Server Issue 2010
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsgenetic databases genome-wide association study genomics single nucleotide polymorphism

T1DBaseDatabase Content

http://www.t1dbase.org

Human Genome > Databases

T1DBase is a database for type 1 diabetes (T1D). It integrates genetic, genomic and expression data relevant to T1D research across mouse, rat and human and presents this to the user as a set of web pages and tools. New data sets include curated summary data from four genome-wide association studies relevant to T1D, HaemAtlas-a data set and tool to query gene expression levels in haematopoietic cells and a manually curated table of human T1D susceptibility loci, incorporating genetic overlap with other related diseases.

NAR Database Issue 2011
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsanimals gene expression genetic databases genetic predisposition to disease genome-wide association study hematopoietic stem cells humans mice rats type 1 diabetes mellitus