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Links tagged with 'gene order'

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IMCB - Fugu Genome ProjectTool Content

http://www.fugu-sg.org/

Model Organisms > Fish

Lots of information on fugu including complete draft sequence, annotations, comparative vertebrate genomics, phylogenies, publications, and information about the fugu genome project; has some very useful tools including annotation tools, an Ensembl mirror, and BLAST.

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tagsanimals base sequence biological evolution computational biology conserved sequence cosmids dna dna sequence analysis dna transposable elements exons factual databases fish proteins fishes gene duplication gene library gene order genetic models genome genomics human genome humans introns japan mammals microsatellite repeats molecular evolution molecular sequence data nucleic acid repetitive sequences open reading frames phylogeny physical chromosome mapping poisonous fishes proteins proteome research satellite dna sequence alignment synteny takifugu vertebrates

SPRINGTool Content

http://algorithm.cs.nthu.edu.tw/tools/SPRING

DNA > Phylogeny Reconstruction
Sequence Comparison > Comparative Genomics

Sorting Permutation by Reversals and Block Interchanges (SPRING) is a tool for the analysis of genome rearrangements. SPRING takes two or more chromosomes as its input and then computes a minimum series of reversals and/or block-interchanges for transforming one chromosome into another. Phylogenetic trees based on the rearrangement analysis are also shown as part of the results.

NAR Web Server Issue 2006
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tagsalgorithms bacterial chromosomes bacterial genome chromosome inversion chromosome mapping chromosomes dna sequence analysis gammaproteobacteria gene order gene rearrangement genetic models genetic recombination genomics molecular evolution nucleic acid sequence homology phylogeny sequence alignment vibrio