>
Tag
> Links tagged with 'dna probes'

Links tagged with 'dna probes'

RSS FeedCompact ViewList as XMLList as JSON

Found 5 links

Displaying 5 links

AStalavistaTool Content

http://genome.imim.es/astalavista/

Expression > Splicing

AStalavista (alternative splicing transcriptional landscape visualization tool) dynamically identifies, extracts, and displays alternative splicing events from whole genome annotations and user provided gene sets.

NAR Web Server Issue 2007
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsalternative splicing chromosome mapping computational biology dna probes dna sequence analysis genetic databases genome humans messenger rna oligonucleotide array sequence analysis rna splice sites

BioconductorTool Content

http://www.bioconductor.org/

Computer Related > Bio-* Programming Tools
Computer Related > Math and Statistics
Expression > Transcript Expression Analysis

Bioconductor is an open source and open development software project that aims to provide access to a wide range of powerful statistical and graphical methods for the analysis of genomic data.

downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsalgorithms biological models computational biology computer simulation database management systems dna probes dna sequence analysis gene expression profiling gene expression regulation information dissemination nucleic acid sequence homology oligonucleotide array sequence analysis reproducibility of results sequence alignment signal transduction transcription factors

ChipInfoTool Content

http://genomics.bioen.illinois.edu/chipinfo/

Expression > Transcript Expression Analysis

ChipInfo extracts gene annotation and gene ontology information from databases like NetAffx and Gene Ontology (GO) for microarray analysis. Output is provided in tabular format and the program is available for download for use on your own machine.

NAR Web Server Issue 2003
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsdna probes gene expression profiling genetic databases oligonucleotide array sequence analysis systems integration

NASTTool Content

http://greengenes.lbl.gov/cgi-bin/nph-NAST_align.cgi

DNA > Phylogeny Reconstruction
Model Organisms > Microbes
RNA > General Resources
Sequence Comparison > Multiple Sequence Alignments

Nearest Alignment Space Termination (NAST) is a multiple sequence alignment server for comparative analysis of 16S rRNA gene sequences from bacteria and archaea.

NAR Web Server Issue 2006
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsalgorithms archaeal genes bacillus anthracis bacterial genes cluster analysis computer-aided design dna probes dna sequence analysis equipment design gene expression profiling nucleic acid sequence homology oligonucleotide array sequence analysis ribosomal rna rrna genes sequence alignment staphylococcus aureus

ProbeLynxTool Content

http://www.pathogenomics.ca/probelynx

DNA > Tools For the Bench
Expression > Transcript Expression Analysis

Using current releases of genomic sequence data, ProbeLynx allows users to assess the specificity of probe sequences used for microarray experiments. The user provides probe sequences in FASTA or tab-delimited format, and ProbeLynx reports specificity information for each probe and functional annotations from Ensembl or TIGR for each probe target hit.

NAR Web Server Issue 2004
downloadDownload as XMLDownload as JSON
user feedback
0
No votes yet
tagsanimals base sequence cattle chickens complementary dna dna probes gene expression profiling genomics humans messenger rna mice nucleic acid databases oligonucleotide array sequence analysis oligonucleotide probes