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Links tagged with 'dictyostelium'

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AD-ENMTool Content

http://enm.lobos.nih.gov

Protein > Annotation and Function
Protein > Domains and Motifs
Protein > Molecular Dynamics and Docking

Analysis of Dynamics of Elastic Network Model (AD-ENM) predicts the conformational changes a given protein structure can undergo.

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tagsactins adenosine triphosphate animals binding sites biophysical phenomena biophysics dictyostelium dna polymerase beta dna-directed rna polymerases elasticity humans kinesin ligands mice molecular conformation molecular models molecular motor proteins myosins nucleotides principal component analysis protein binding protein conformation proton-translocating atpases protozoan proteins secondary protein structure statistical models structure-activity relationship taq polymerase tertiary protein structure theoretical models thermodynamics viral proteins x-ray crystallography

dictyBase update 2011Database Content

http://www.dictybase.org

Model Organisms > Databases

dictyBase, the model organism database for Dictyostelium, provides well integrated, high quality data and tools for Dictyostelium discoideum and related species. dictyBase houses the complete genome sequence, ESTs, and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome to provide a 'reference genome' in the Amoebozoa clade. New features include ortholog display and the complete integration of the Dicty Stock Center with dictyBase.

This content is being maintained by rexchisholm.

NAR Database Issue 2011
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tagsamoebozoa dictyostelium genetic databases molecular sequence annotation protozoan genome protozoan proteins systems integration

GenePath2Tool Content

http://www.genepath.org/genepath2

Protein > Interactions, Pathways, Enzymes

GenePath is a tool for automated construction of genetic networks and proposal of genetic experiments from mutant data.

NAR Web Server Issue 2005
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tagsanimals artificial intelligence caenorhabditis elegans computational biology dictyostelium dna dna mutational analysis dna sequence analysis expert systems gene expression regulation genes genetic epistasis genetic models genomics humans knowledge larva mutation neural networks (computer) research single-blind method

SWISS-2DPAGEDatabase Content

http://us.expasy.org/ch2d/

Expression > Protein Expression
Protein > Protein Expression

This is a 2D gel electrophoresis database containing data for proteins identified on SDS-PAGE or 2D-PAGE reference maps.

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tagsanimals dictyostelium escherichia coli factual databases gel electrophoresis humans mice saccharomyces cerevisiae