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Links tagged with 'biotechnology'

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EBI patent sequence databaseDatabase Content

http://www.ebi.ac.uk/patentdata/nr/

DNA > Databases

The EBI Patent Sequence Database is a collection of non-redundant patent sequence databases, which cover the EMBL-Bank nucleotides patent class and the patent protein databases and contain value-added annotations from patent documents.

NAR Database Issue 2010
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tagsalgorithms animals biotechnology computational biology europe factual databases gene expression profiling genetic databases humans patents as topic protein databases
setsEuropean Bioinformatics Institute (EBI)

EBI ToolsTool Content

http://www.ebi.ac.uk/Tools/webservices/

Computer Related > Web Services
DNA > Sequence Retrieval and Submission
Education > Directories and Portals
Literature > Search Tools
Protein > 3-D Structure Comparison
Protein > Domains and Motifs
Protein > Sequence Retrieval
RNA > Sequence Retrieval
Sequence Comparison > Multiple Sequence Alignments
Sequence Comparison > Similarity Searching

EBI Tools is a project that aims to provide programmatic access to the various databases and retrieval and analysis services that the European Bioinformatics Institute (EBI) provides through Simple Object Access Protocol (SOAP) and other related web service technologies.

NAR Web Server Issue 2005NAR Web Server Issue 2007NAR Web Server Issue 2009
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tagsbibliographic databases biotechnology computational biology europe genetic databases nucleic acids protein sequence analysis proteins sequence alignment sequence analysis sequence homology systems integration

ISfinderDatabase Content

http://www-is.biotoul.fr

DNA > Databases

ISfinder is a dedicated insertion sequence (IS) database which assigns names to individual ISs to maintain a coherent nomenclature, an IS repository including >3000 individual ISs from both bacteria and archaea and provides a basis for IS classification. Each IS is indexed in ISfinder with various associated pieces of information (the complete nucleotide sequence, the sequence of the ends and target sites, potential open reading frames, strain of origin, distribution in other strains and available bibliography) and classified into a group or family to provide some insight into its phylogeny. ISfinder also includes extensive background information on ISs and transposons in general. ISbrowser, an extension to the ISfinder platform and a tool, which permits visualization of the position, orientation and distribution of complete and partial ISs in individual prokaryotic genomes.

This content is being maintained by mchandler.

NAR Database Issue 2010
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tagsalgorithms bacterial genome biotechnology computational biology gene expression profiling genetic databases nucleic acid databases phylogeny prokaryotic cells protein databases

NCBI Map ViewerTool Content

http://www.ncbi.nlm.nih.gov/mapview/map_search.cgi

DNA > Annotations
Human Genome > Annotations

The NCBI Map Viewer provides graphical displays of features on NCBI\'s assembly of human genomic sequence data as well as cytogenetic, genetic, physical, and radiation hybrid maps.

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tagsanimals biotechnology chromosome mapping gene expression profiling genes genetic databases genome humans mice molecular models phenotype sequence alignment sequence homology tertiary protein structure united states
setsNational Center for Biotechnology Information (NCBI)