Sequence Comparison

Tools and resources for the comparison of sequences including sequence similarity searching, alignment tools, and general comparative genomics resources.

  • Tools for viewing, coloring, and editing sequence alignments.

  • Resources for the interpretation of the results of comparing sets of sequences. Includes tools for functional inference from multispecies comparisons.

  • General resources for comparison of sequences and genomes.

  • Resources for generating multiple sequence alignments from sets of sequences.

  • Tools for aligning sets of sequences to a reference sequence (for example, cDNA to genomic).

  • Methods and tools for aligning pairs of sequences.

  • Resources for retrieving sequences similar to your query. Also includes tools for searching for similar sequence profiles.