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Carbohydrates

Tools for dealing with the bioinformatics of carbohydrate structures

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GlycoViewerTool Content

http://www.systemsbiology.org.au/glycoviewer

Other Molecules > Carbohydrates

The GlycoViewer is a web-based tool that can visualize, summarize and compare sets of gylcan structures.

NAR Web Server Issue 2010
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tagsglycomics glycoproteins humans neoplasms polysaccharides

GlyNest and CASPERTool Content

http://www.glycosciences.de/sweetdb/start.php?action=form_shift_estimation

Other Molecules > Carbohydrates

GlyNest and CASPER are two independent services, available through this common interface, for predicting NMR spectra given a glycan chemical structure.

This content is being maintained by luetteke.

NAR Web Server Issue 2006
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tagsalgorithms automatic data processing bacterial capsules bacterial polysaccharides biomolecular nuclear magnetic resonance carbohydrate conformation carbohydrate sequence carbohydrates carbon isotopes computational biology computer simulation factual databases forecasting glycopeptides glycoproteins hydrogen magnetic resonance spectroscopy molecular models molecular sequence data molecular structure o antigens oligosaccharides polysaccharides systems integration three-dimensional imaging

GlyprotTool Content

http://www.glycosciences.de/modeling/glyprot/php/main.php

Other Molecules > Carbohydrates
Protein > 3-D Structural Features

Glyprot is a tool for predicting and modelling all potential N-glycosylation sites in a given 3D structure.

This content is being maintained by luetteke.

NAR Web Server Issue 2005
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tagscomputational biology glycoproteins glycosylation humans molecular models protein conformation protein isoforms

NetOGlyc Prediction ServerTool Content

http://www.cbs.dtu.dk/services/NetOGlyc/

Other Molecules > Carbohydrates
Protein > Domains and Motifs

Predicts mucin type GalNAc O-glycosylation sites in mammalian proteins.

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tagsalgorithms amino acid sequence animals binding sites carbohydrate conformation factual databases glycoproteins glycosylation hiv envelope protein gp120 humans information systems mammals membrane glycoproteins molecular sequence data mucins n-acetylgalactosaminyltransferases n-acetylglucosaminyltransferases neural networks (computer) protein conformation reproducibility of results secondary protein structure serine substrate specificity threonine viral envelope proteins

SEARCHGTrTool Content

http://www.nii.res.in/searchgtr.html

Other Molecules > Carbohydrates
Protein > Domains and Motifs

SEARCHGTr is a tool for the analysis of glycosyltransferases (GTrs) that allows you to compare a query sequence with the sequences of characterized GTrs.

NAR Web Server Issue 2005
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tagsanti-bacterial agents binding sites computational biology glycosylation glycosyltransferases metabolism protein conformation protein sequence analysis substrate specificity

Tags associated with subcategory 'Other Molecules/Carbohydrates'

humans polysaccharides glycoproteins algorithms glycosylation carbohydrate sequence computational biology protein conformation binding sites factual databases carbohydrate conformation substrate specificity molecular sequence data mass spectrometry molecular models forecasting membrane glycoproteins bacterial capsules mammals information systems biomolecular nuclear magnetic resonance hiv envelope protein gp120 bacterial polysaccharides mucins n-acetylgalactosaminyltransferases serine glycomics threonine secondary protein structure reproducibility of results n-acetylglucosaminyltransferases neural networks (computer) automatic data processing anti-bacterial agents amino acid sequence oligosaccharides systems integration three-dimensional imaging o antigens molecular structure glycopeptides hydrogen magnetic resonance spectroscopy glycosyltransferases metabolism animals carbohydrates neoplasms carbon isotopes computer simulation protein sequence analysis viral envelope proteins protein isoforms